Lineage for d1ww1a1 (1ww1 A:1-280)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1937671Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
    duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
  4. 1937672Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (15 families) (S)
  5. 1937968Family d.157.1.7: RNase Z-like [143916] (1 protein)
    part of Pfam PF00753; tRNA 3'-endonuclease; elaborated with additional structures and insert alpha(2)-beta(2) subdomain
  6. 1937969Protein Ribonuclease Z (RNase Z) [143917] (3 species)
  7. 1937976Species Thermotoga maritima [TaxId:2336] [143920] (2 PDB entries)
    Uniprot Q9WZW8 1-280
  8. 1937979Domain d1ww1a1: 1ww1 A:1-280 [121348]
    insert subdomain is disordered in this structure
    complexed with zn

Details for d1ww1a1

PDB Entry: 1ww1 (more details), 2.6 Å

PDB Description: Crystal structure of tRNase Z from Thermotoga maritima
PDB Compounds: (A:) tRNase Z

SCOPe Domain Sequences for d1ww1a1:

Sequence, based on SEQRES records: (download)

>d1ww1a1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}
mniigfskalfstwiyysperilfdagegvsttlgskvyafkyvflthghvdhiaglwgv
vnirnngmgdrekpldvfypegnraveeytefikranpdlrfsfnvhplkegervflrna
ggfkryvqpfrtkhvssevsfgyhifevrrklkkefqgldskeisrlvkekgrdfvteey
hkkvltisgdslaldpeeirgtellihectfldardrryknhaaidevmesvkaagvkkv
ilyhistryirqlksvikkyreempdveilymdprkvfem

Sequence, based on observed residues (ATOM records): (download)

>d1ww1a1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}
mniigfskalfstwiyysperilfdagegvsttlgskvyafkyvflthghvdhiaglwgv
vnirnngmgdrekpldvfypegnraveeytefikranpdlrfsfnvhplkegervflrna
ggfkryvqpfrtksevsfgyhifevrrkfvteeyhkkvltisgdslaldpeeirgtelli
hectfldardnhaaidevmesvkaagvkkvilyhistryirqlksvikkyreempdveil
ymdprkvfem

SCOPe Domain Coordinates for d1ww1a1:

Click to download the PDB-style file with coordinates for d1ww1a1.
(The format of our PDB-style files is described here.)

Timeline for d1ww1a1: