SCOPe 2.05: Domain d1wull_: 1wul L:

Lineage for d1wull_ (1wul L:)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio vulgaris [TaxId:883] [186833] (7 PDB entries)

8. Domain d1wull_: 1wul L: [121295]
   Other proteins in same PDB: d1wuls_
   automated match to d1e3db_
   complexed with f3s, mg, mpd, mrd, nfr, sf4

Details for d1wull_

PDB Entry: 1wul, 1.5 Å

PDB Description: high resolution structure of the reduced state of [nife]hydrogenase from desulufovibrio vulgaris miyazaki f

PDB Compounds: (L:) Periplasmic [NiFe] hydrogenase Large subunit

SCOPe Domain Sequences for d1wull_:

Sequence; same for both SEQRES and ATOM records:

>d1wull_ e.18.1.1 (L:) automated matches {Desulfovibrio vulgaris [TaxId: 883]}
ssysgpivvdpvtrieghlrievevengkvknayssstlfrgleiilkgrdprdaqhftq
rtcgvctythalastrcvdnavgvhipknatyirnlvlgaqylhdhivhfyhlhaldfvd
vtaalkadpakaakvassisprkttaadlkavqdklktfvetgqlgpftnayflgghpay
yldpetnliatahylealrlqvkaaramavfgaknphtqftvvggvtcydaltpqriaef
ealwketkafvdevyipdllvvaaaykdwtqyggtdnfitfgefpkdeydlnsrffkpgv
vfkrdfknikpfdkmqieehvrhswyegaearhpwkgqtqpkytdlhgddryswmkapry
mgepmetgplaqvliaysqghpkvkavtdavlaklgvgpealfstlgrtaargietavia
eyvgvmlqeykdniakgdnvicapwempkqaegvgfvnaprgglshwiriedgkignfql
vvpstwtlgprcdknklspveasligtpvadakrpveilrtvhsfdpciacgvh

Timeline for d1wull_:

• d1wull_ first appeared in SCOP 1.73, called d1wull1
  
• d1wull_ appears in SCOPe 2.04
  
• d1wull_ appears in SCOPe 2.06
  
• d1wull_ appears in the current release, SCOPe 2.08