Lineage for d1w8qb_ (1w8q B:)

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2618349Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 2618350Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families) (S)
  5. 2619647Family e.3.1.3: Dac-like [144040] (3 proteins)
    Pfam PF02113; D-Ala-D-Ala carboxypeptidase 3 (S13) family; contains a large insertion comprising two subdomains: (d1) aplha+beta with topological similarity to one subunit of the DTD-like family (69501) and (d2) six-stranded beta-sandwich with a crossed-loop topology
  6. 2619648Protein D-alanyl-D-alanine carboxypeptidase Dac [144043] (1 species)
  7. 2619649Species Actinomadura sp. [TaxId:1989] [144044] (19 PDB entries)
    Uniprot P39045 50-516
  8. 2619707Domain d1w8qb_: 1w8q B: [120731]
    automated match to d1w79a1
    complexed with co, so4

Details for d1w8qb_

PDB Entry: 1w8q (more details), 2.85 Å

PDB Description: crystal structure of the dd-transpeptidase-carboxypeptidase from actinomadura r39
PDB Compounds: (B:) d-alanyl-d-alanine carboxypeptidase

SCOPe Domain Sequences for d1w8qb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1w8qb_ e.3.1.3 (B:) D-alanyl-D-alanine carboxypeptidase Dac {Actinomadura sp. [TaxId: 1989]}
rltelredidailedpalegavsgvvvvdtatgeelysrdggeqllpasnmklftaaaal
evlgadhsfgtevaaesapgrrgevqdlylvgrgdptlsaedldamaaevaasgvrtvrg
dlyaddtwfdserlvddwwpedepyaysaqisaltvahgerfdtgvtevsvtpaaegepa
dvdlgaaegyaeldnravtgaagsantlvidrpvgtntiavtgslpadaapvtalrtvde
paalaghlfeealesngvtvkgdvglggvpadwqdaevladhtsaelseilvpfmkfsnn
ghaemlvksigqetagagtwdaglvgveealsglgvdtaglvlndgsglsrgnlvtadtv
vdllgqagsapwaqtwsaslpvagesdpfvggtlanrmrgtaaegvveaktgtmsgvsal
sgyvpgpegelafsivnnghsgpaplavqdaiavrlaeyaghqape

SCOPe Domain Coordinates for d1w8qb_:

Click to download the PDB-style file with coordinates for d1w8qb_.
(The format of our PDB-style files is described here.)

Timeline for d1w8qb_: