Lineage for d1vs8v1 (1vs8 V:1-94)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 672943Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 672944Superfamily b.53.1: Ribosomal protein L25-like [50715] (2 families) (S)
  5. 672945Family b.53.1.1: Ribosomal protein L25-like [50716] (2 proteins)
  6. 672946Protein Ribosomal protein L25 [50717] (1 species)
  7. 672947Species Escherichia coli [TaxId:562] [50718] (12 PDB entries)
  8. 672956Domain d1vs8v1: 1vs8 V:1-94 [120514]
    Other proteins in same PDB: d1vs801, d1vs811, d1vs821, d1vs831, d1vs841, d1vs8l1, d1vs8m1, d1vs8p1, d1vs8r1, d1vs8u1, d1vs8x1, d1vs8z1
    automatically matched to d1b75a_
    complexed with mg

Details for d1vs8v1

PDB Entry: 1vs8 (more details), 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (V:) 50S ribosomal protein L25

SCOP Domain Sequences for d1vs8v1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vs8v1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
ltivvdgkeikvkaqdvqrhpykpklqhidfvra

SCOP Domain Coordinates for d1vs8v1:

Click to download the PDB-style file with coordinates for d1vs8v1.
(The format of our PDB-style files is described here.)

Timeline for d1vs8v1: