Lineage for d1vs8p1 (1vs8 P:1-114)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 665027Fold b.34: SH3-like barrel [50036] (18 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 665509Superfamily b.34.5: Translation proteins SH3-like domain [50104] (6 families) (S)
    many known members contain KOW motif
  5. 665696Family b.34.5.6: Ribosomal protein L19 [141245] (1 protein)
    Pfam PF01245
  6. 665697Protein Ribosomal protein L19 [141246] (1 species)
  7. 665698Species Escherichia coli [TaxId:562] [141247] (9 PDB entries)
  8. 665704Domain d1vs8p1: 1vs8 P:1-114 [120511]
    Other proteins in same PDB: d1vs801, d1vs811, d1vs821, d1vs831, d1vs841, d1vs8l1, d1vs8m1, d1vs8r1, d1vs8u1, d1vs8v1, d1vs8x1, d1vs8z1
    automatically matched to 2AW4 P:1-114
    complexed with mg

Details for d1vs8p1

PDB Entry: 1vs8 (more details), 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (P:) 50S ribosomal protein L19

SCOP Domain Sequences for d1vs8p1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vs8p1 b.34.5.6 (P:1-114) Ribosomal protein L19 {Escherichia coli [TaxId: 562]}
sniikqleqeqmkqdvpsfrpgdtvevkvwvvegskkrlqafegvviairnrglhsaftv
rkisngegvervfqthspvvdsisvkrrgavrkaklyylrertgkaarikerln

SCOP Domain Coordinates for d1vs8p1:

Click to download the PDB-style file with coordinates for d1vs8p1.
(The format of our PDB-style files is described here.)

Timeline for d1vs8p1: