SCOPe 2.05: Domain d1vs821: 1vs8 2:1-46

Lineage for d1vs821 (1vs8 2:1-46)

1. Root: SCOPe 2.05

2. Class j: Peptides [58231] (129 folds)

3. Fold j.118: Ribosomal protein L34p [144320] (1 superfamily)
   non-globular, mainly alpha-helical

4. Superfamily j.118.1: Ribosomal protein L34p [144321] (1 family)

5. Family j.118.1.1: Ribosomal protein L34p [144322] (1 protein)
   Pfam PF00468

6. Protein Ribosomal protein L34p [144323] (3 species)

7. Species Escherichia coli [TaxId:562] [144324] (8 PDB entries)
   Uniprot P0A7P5 1-46

8. Domain d1vs821: 1vs8 2:1-46 [120506]
   Other proteins in same PDB: d1vs801, d1vs811, d1vs831, d1vs841, d1vs8c1, d1vs8c2, d1vs8d1, d1vs8e1, d1vs8f1, d1vs8g1, d1vs8g2, d1vs8h1, d1vs8h2, d1vs8i1, d1vs8i2, d1vs8j1, d1vs8k1, d1vs8l1, d1vs8m1, d1vs8n1, d1vs8o1, d1vs8p1, d1vs8q1, d1vs8r1, d1vs8s1, d1vs8t1, d1vs8u1, d1vs8v1, d1vs8w1, d1vs8x1, d1vs8y1, d1vs8z1
   complexed with mg
   complexed with mg

Details for d1vs821

PDB Entry: 1vs8, 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.

PDB Compounds: (2:) 50S ribosomal protein L34

SCOPe Domain Sequences for d1vs821:

Sequence; same for both SEQRES and ATOM records:

>d1vs821 j.118.1.1 (2:1-46) Ribosomal protein L34p {Escherichia coli [TaxId: 562]}
mkrtfqpsvlkrnrshgfrarmatkngrqvlarrrakgrarltvsk

Timeline for d1vs821:

• d1vs821 first appeared in SCOP 1.73
  
• d1vs821 appears in SCOPe 2.04
  
• d1vs821 appears in SCOPe 2.06
  
• d1vs821 appears in the current release, SCOPe 2.08