SCOP 1.73: Domain d1vs811: 1vs8 1:1-54

Lineage for d1vs811 (1vs8 1:1-54)

1. Root: SCOP 1.73

2. Class g: Small proteins [56992] (85 folds)

3. Fold g.41: Rubredoxin-like [57769] (16 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.8: Zn-binding ribosomal proteins [57829] (6 families)

5. Family g.41.8.6: Ribosomal protein L33p [144203] (1 protein)
   Pfam PF00471; corresponds structurally and functionally to the ribosomal L44e from eukaryota and archaea; metal ion-binding site is lost in most members

6. Protein Ribosomal protein L33p [144204] (1 species)

7. Species Escherichia coli [TaxId:562] [144205] (9 PDB entries)

8. Domain d1vs811: 1vs8 1:1-54 [120505]
   Other proteins in same PDB: d1vs801, d1vs821, d1vs831, d1vs841, d1vs8l1, d1vs8m1, d1vs8p1, d1vs8r1, d1vs8u1, d1vs8v1, d1vs8x1, d1vs8z1
   automatically matched to 2AW4 1:1-54
   complexed with mg

Details for d1vs811

PDB Entry: 1vs8, 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.

PDB Compounds: (1:) 50S ribosomal protein L33

SCOP Domain Sequences for d1vs811:

Sequence; same for both SEQRES and ATOM records:

>d1vs811 g.41.8.6 (1:1-54) Ribosomal protein L33p {Escherichia coli [TaxId: 562]}
akgirekiklvssagtghfytttknkrtkpeklelkkfdpvvrqhviykeakik

Timeline for d1vs811:

• d1vs811 is new in SCOP 1.73
  
• d1vs811 appears in SCOP 1.75
  
• d1vs811 appears in the current release, SCOPe 2.08