SCOP 1.73: Domain d1vrbd1: 1vrb D:8-326

Lineage for d1vrbd1 (1vrb D:8-326)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (12 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.11: Asparaginyl hydroxylase-like [141633] (1 protein)
   Pfam PF08007

6. Protein Putative asparaginyl hydroxylase YxbC [141634] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [141635] (1 PDB entry)

8. Domain d1vrbd1: 1vrb D:8-326 [120453]
   automatically matched to 1VRB A:8-326
   complexed with fe

Details for d1vrbd1

PDB Entry: 1vrb, 2.6 Å

PDB Description: Crystal structure of Putative asparaginyl hydroxylase (2636534) from Bacillus subtilis at 2.60 A resolution

PDB Compounds: (D:) Putative asparaginyl hydroxylase

SCOP Domain Sequences for d1vrbd1:

Sequence, based on SEQRES records:

>d1vrbd1 b.82.2.11 (D:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}
vlesiispvtmsefleeywpvkplvargeverftsipgfekvrtlenvlaiynnpvmvvg
davieesegitdrflvspaealewyekgaalefdftdlfipqvrrwieklkaelrlpagt
sskaivyaakngggfkahfdaytnlifqiqgektwklaknenvsnpmqhydlseapyypd
dlqsywkgdppkedlpdaeivnltpgtmlylprglwhstksdqatlalnitfgqpawldl
mlaalrkklisdnrfrelavnhqslhesskselngylesliqtlsenaetltpeqifqsq
dsdfdpyqstqlvfrqllt

Sequence, based on observed residues (ATOM records):

>d1vrbd1 b.82.2.11 (D:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}
vlesiispvtmsefleeywpvkplvargeverftsipgfekvrtlenvlaiynnpvmvvg
davieesdrflvspaealewyekgaalefdftdlfipqvrrwieklkaelrlpagtsska
ivyaakngggfkahfdaytnlifqiqgektwklaknenvsnpmqhydlseapyypddlqs
ywkgdppkedlpdaeivnltpgtmlylprglwhstksdqatlalnitfgqpawldlmlaa
lrkklisdnrfrelavnhqesskselngylesliqtlsenaetltpeqifqsqdsdfdpy
qstqlvfrqllt

Timeline for d1vrbd1:

• d1vrbd1 is new in SCOP 1.73
  
• d1vrbd1 appears in SCOP 1.75
  
• d1vrbd1 appears in the current release, SCOPe 2.08, called d1vrbd_