SCOP 1.73: Domain d1vq1b1: 1vq1 B:12-281

Lineage for d1vq1b1 (1vq1 B:12-281)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (52 families)

5. Family c.66.1.30: N5-glutamine methyltransferase, HemK [89743] (1 protein)

6. Protein N5-glutamine methyltransferase, HemK [89744] (2 species)
   contains an N-terminal alpha helical subdomain; res. 13-84

7. Species Thermotoga maritima [TaxId:2336] [89745] (4 PDB entries)

8. Domain d1vq1b1: 1vq1 B:12-281 [120068]
   automatically matched to d1sg9a_
   complexed with sam

Details for d1vq1b1

PDB Entry: 1vq1, 2.8 Å

PDB Description: Crystal structure of N5-glutamine methyltransferase, HemK(EC 2.1.1.-) (TM0488) from Thermotoga maritima at 2.80 A resolution

PDB Compounds: (B:) N5-glutamine methyltransferase, HemK

SCOP Domain Sequences for d1vq1b1:

Sequence, based on SEQRES records:

>d1vq1b1 c.66.1.30 (B:12-281) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
rkiwslirdcsgklegvtetsvlevllivsrvlgirkedlflkdlgvspteekrilelve
krasgyplhyilgekefmglsflveegvfvprpeteelvelalelirkygiktvadigtg
sgaigvsvakfsdaivfatdvsskaveiarknaerhgvsdrffvrkgeflepfkekfasi
emilsnppyvkssahlpkdvlfeppealfggedgldfyreffgrydtsgkivlmeigedq
veelkkivsdtvflkdsagkyrflllnrrs

Sequence, based on observed residues (ATOM records):

>d1vq1b1 c.66.1.30 (B:12-281) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}
rkiwslirdcsgklegvtetsvlevllivsrvlgirkedlflkdlgvspteekrilelve
krasgyplhyilgekefmglsflveegvfvprpeteelvelalelirkygiktvadigtg
sgaigvsvakfsdaivfatdvsskaveiarknaerhgvsdrffvrkgeflepfkekfasi
emilsnppyvksslfeppealfggedgldfyreffgrydtsgkivlmeigedqveelkki
vsdtvflkdsagkyrflllnrrs

Timeline for d1vq1b1:

• d1vq1b1 is new in SCOP 1.73
  
• d1vq1b1 appears in SCOP 1.75
  
• d1vq1b1 appears in the current release, SCOPe 2.08, called d1vq1b_