SCOPe 2.04: Domain d1vf8a1: 1vf8 A:1-245,A:316-373

Lineage for d1vf8a1 (1vf8 A:1-245,A:316-373)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.5: Type II chitinase [51534] (15 proteins)
   glycosylase family 18

6. Protein Chitinase-like lectin ym1, saccharide binding domain [63910] (1 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [63911] (2 PDB entries)

8. Domain d1vf8a1: 1vf8 A:1-245,A:316-373 [120029]
   Other proteins in same PDB: d1vf8a2
   automated match to d1e9la1

Details for d1vf8a1

PDB Entry: 1vf8, 1.31 Å

PDB Description: The Crystal Structure of Ym1 at 1.31 A Resolution

PDB Compounds: (A:) secretory protein

SCOPe Domain Sequences for d1vf8a1:

Sequence; same for both SEQRES and ATOM records:

>d1vf8a1 c.1.8.5 (A:1-245,A:316-373) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]}
yqlmcyytswakdrpiegsfkpgnidpclcthliyafagmqnneitytheqdlrdyealn
glkdkntelktllaiggwkfgpapfsamvstpqnrqifiqsvirflrqynfdglnldwqy
pgsrgsppkdkhlfsvlvkemrkafeeesvekdiprllltstgagiidviksgykipels
qsldyiqvmtydlhdpkdgytgensplykspydigksadlnvdsiisywkdhgaasekli
vgfpaXdnvrsfklkaqwlkdnnlggavvwpldmddfsgsfchqrhfpltstlkgdlnih
sasc

Timeline for d1vf8a1:

• d1vf8a1 first appeared in SCOP 1.73
  
• d1vf8a1 appears in SCOPe 2.03
  
• d1vf8a1 appears in SCOPe 2.05
  
• d1vf8a1 appears in the current release, SCOPe 2.08