Lineage for d1vepa2 (1vep A:1-417)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 682152Superfamily c.1.8: (Trans)glycosidases [51445] (14 families) (S)
  5. 682153Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 682303Protein Bacterial beta-amylase [51485] (1 species)
    protein contains additional starch-binding domain
  7. 682304Species Bacillus cereus [TaxId:1396] [51486] (14 PDB entries)
  8. 682317Domain d1vepa2: 1vep A:1-417 [120028]
    Other proteins in same PDB: d1vepa1
    automatically matched to d1b90a2
    complexed with ca, glc; mutant

Details for d1vepa2

PDB Entry: 1vep (more details), 2.06 Å

PDB Description: crystal structure analysis of triple (t47m/y164e/t328n)/maltose of bacillus cereus beta-amylase at ph 6.5
PDB Compounds: (A:) beta-amylase

SCOP Domain Sequences for d1vepa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vepa2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]}
avngkgmnpdykaylmaplkkipevtnwetfendlrwakqngfyaimvdfwwgdmekngd
qqfdfsyaqrfaqsvknagmkmipiisthqcggnvgddcnvpipswvwnqksddslyfks
etgtvnketlnplasdvirkeygelytafaaamkpykdviakielsggpagelrypsytt
sdgtgypsrgkfqaytefakskfrlwvlnkygslnevnkawgtkliselailppsdgeqf
lmngylsmygkdylewyqgilenhtkligelahnafdttfqvpigakiagvhwqynnpti
phgaekpagyndyshlldafksakldvnftclemtdkgsypeysmpktlvqniatlanek
givlngenalsigneeeykrvaemafnynfagftllryqdvmynnslmgkfkdllgv

SCOP Domain Coordinates for d1vepa2:

Click to download the PDB-style file with coordinates for d1vepa2.
(The format of our PDB-style files is described here.)

Timeline for d1vepa2:

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Domains from same chain:
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d1vepa1