Lineage for d1vcvb_ (1vcv B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2420460Family c.1.10.1: Class I aldolase [51570] (13 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2421010Protein automated matches [190095] (28 species)
    not a true protein
  7. 2421222Species Pyrobaculum aerophilum [TaxId:13773] [187314] (1 PDB entry)
  8. 2421223Domain d1vcvb_: 1vcv B: [119989]
    Other proteins in same PDB: d1vcva1
    automated match to d1vcva1
    complexed with zn

Details for d1vcvb_

PDB Entry: 1vcv (more details), 2 Å

PDB Description: Structure of 2-deoxyribose-5-phosphate aldolase from Pyrobaculum aerophilum
PDB Compounds: (B:) Probable deoxyribose-phosphate aldolase

SCOPe Domain Sequences for d1vcvb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vcvb_ c.1.10.1 (B:) automated matches {Pyrobaculum aerophilum [TaxId: 13773]}

SCOPe Domain Coordinates for d1vcvb_:

Click to download the PDB-style file with coordinates for d1vcvb_.
(The format of our PDB-style files is described here.)

Timeline for d1vcvb_: