![]() | Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
![]() | Fold d.308: THUMP domain [143436] (1 superfamily) contains mixed 8-stranded beta-sheet, folded into a half-barrel and covered with 4 helices on the outside; order 32148756; strands 5, 6 and 7 are parallel |
![]() | Superfamily d.308.1: THUMP domain-like [143437] (3 families) ![]() predicted RNA-binding function |
![]() | Family d.308.1.1: THUMP domain [143438] (2 proteins) Pfam PF02926 |
![]() | Protein Hypothetical protein PH1313, N-terminal domain [143441] (1 species) |
![]() | Species Pyrococcus horikoshii [TaxId:53953] [143442] (1 PDB entry) Uniprot O59053 1-175 |
![]() | Domain d1vbkb2: 1vbk B:1-175 [119960] Other proteins in same PDB: d1vbka1, d1vbkb1 automated match to d1vbka2 complexed with mrd |
PDB Entry: 1vbk (more details), 1.9 Å
SCOPe Domain Sequences for d1vbkb2:
Sequence, based on SEQRES records: (download)
>d1vbkb2 d.308.1.1 (B:1-175) Hypothetical protein PH1313, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} mnvvivrygeigtksrqtrswfekilmnnirealvteevpykeifsrhgriivktnspke aanvlvrvfgivsispameveaslekinrtallmfrkkakevgkerpkfrvtarritkef pldsleiqakvgeyilnnencevdlknydieigieimqgkayiytekikgwgglp
>d1vbkb2 d.308.1.1 (B:1-175) Hypothetical protein PH1313, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} mnvvivryksrqtrswfekilmnnirealvteevpykeifsrhgriivktnspkeaanvl vrvfgivsispameveaslekinrtallmfrkkakevgkerpkfrvtarritkefpldsl eiqakvgeyilnnencevdlknydieigieimqgkayiytekikgwgglp
Timeline for d1vbkb2: