SCOPe 2.08: Domain d1vbha3: 1vbh A:3-382

Lineage for d1vbha3 (1vbh A:3-382)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.5: Pyruvate phosphate dikinase, N-terminal domain [56085] (2 proteins)
   automatically mapped to Pfam PF01326

6. Protein Pyruvate phosphate dikinase, N-terminal domain [56086] (3 species)
   the common fold is interrupted by a 4-helical subdomain (residues 112-198)

7. Species Maize (Zea mays) [TaxId:4577] [143889] (2 PDB entries)
   Uniprot P11155 74-453

8. Domain d1vbha3: 1vbh A:3-382 [119956]
   Other proteins in same PDB: d1vbha1, d1vbha2
   automated match to d1vbga3
   complexed with mg, pep, so4

Details for d1vbha3

PDB Entry: 1vbh, 2.3 Å

PDB Description: pyruvate phosphate dikinase with bound mg-pep from maize

PDB Compounds: (A:) pyruvate,orthophosphate dikinase

SCOPe Domain Sequences for d1vbha3:

Sequence, based on SEQRES records:

>d1vbha3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]}
kkrvfhfgkgksegnktmkellggkganlaemasiglsvppgftvsteacqqyqdagcal
paglwaeivdglqwveeymgatlgdpqrplllsvrsgaavsmpgmmdtvlnlglndevaa
glaaksgerfaydsfrrfldmfgnvvmdiprslfeeklehmkeskglkndtdltasdlke
lvgqykevylsakgepfpsdpkkqlelavlavfnswesprakkyrsinqitglrgtavnv
qcmvfgnmgntsgtgvlftrnpntgekklygeflvnaqgedvvagirtpedldamknlmp
qaydelvencnileshykemqdieftvqenrlwmlqcrtgkrtgksavkiavdmvneglv
eprsaikmvepghldqllhp

Sequence, based on observed residues (ATOM records):

>d1vbha3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]}
kkrvfhfgkgksegnktmkellggkganlaemasiglsvppgftvsteacqqyqdagcal
paglwaeivdglqwveeymgatlgdpqrplllsvrsgaavsmpgmmdtvlnlglndevaa
glaaksgerfaydsfrrfldmfgnvvmdiprslfeeklehmkeskglkndtdltasdlke
lvgqykevylsakgepfpsdpkkqlelavlavfnswesprakkyrsinqitglrgtavnv
qcmvfgnmgntsgtgvlftrnpntgekklygeflvnartpedldamknlmpqaydelven
cnileshykemqdieftvqenrlwmlqcrtgkrtgksavkiavdmvneglveprsaikmv
epghldqllhp

Timeline for d1vbha3:

• d1vbha3 first appeared in SCOP 1.73
  
• d1vbha3 appears in SCOPe 2.07