Lineage for d1vaxf1 (1vax F:142-297)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.96: T-fold [55619] (2 superfamilies)
    beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
    tunnel-shaped: its known members form wide oligomeric barrels different sizes
  4. Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (5 families) (S)
    bind purine or pterin in topologically similar sites between subunits
  5. Family d.96.1.4: Urate oxidase (uricase) [55633] (2 proteins)
    automatically mapped to Pfam PF01014
  6. Protein Urate oxidase (uricase) [55634] (3 species)
    duplication: one subunit consists of two domains of this fold; beta-sheets of two subunits form a barrel, closed: n=16, S=16
  7. Species Arthrobacter globiformis [TaxId:1665] [143630] (2 PDB entries)
  8. Domain d1vaxf1: 1vax F:142-297 [119920]
    automated match to d1vaxa1

Details for d1vaxf1

PDB Entry: 1vax (more details), 1.99 Å

PDB Description: Crystal Structure of Uricase from Arthrobacter globiformis
PDB Compounds: (F:) Uric acid oxidase

SCOPe Domain Sequences for d1vaxf1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vaxf1 d.96.1.4 (F:142-297) Urate oxidase (uricase) {Arthrobacter globiformis [TaxId: 1665]}
seqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarwryntvevdfda
vyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnkhhflvdlqpfg
qdnpnevfyaadrpyglieatiqregsradhpiwsn

SCOPe Domain Coordinates for d1vaxf1 are not available.

Timeline for d1vaxf1:

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Domains from same chain:
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d1vaxf2
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Domains from other chains:
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d1vaxa1, d1vaxa2, d1vaxb1, d1vaxb2, d1vaxc1, d1vaxc2, d1vaxd1, d1vaxd2, d1vaxe1, d1vaxe2, d1vaxg1, d1vaxg2, d1vaxh1, d1vaxh2