SCOPe 2.06: Domain d1vaha2: 1vah A:1-408

Lineage for d1vaha2 (1vah A:1-408)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (25 species)
   not a true protein

7. Species Pig (Sus scrofa) [TaxId:9823] [225875] (3 PDB entries)

8. Domain d1vaha2: 1vah A:1-408 [119906]
   Other proteins in same PDB: d1vaha1
   automated match to d1jxka2
   complexed with ca, cl, npo

Details for d1vaha2

PDB Entry: 1vah, 2.4 Å

PDB Description: crystal structure of the pig pancreatic-amylase complexed with r- nitrophenyl-a-d-maltoside

PDB Compounds: (A:) alpha-amylase, pancreatic

SCOPe Domain Sequences for d1vaha2:

Sequence; same for both SEQRES and ATOM records:

>d1vaha2 c.1.8.1 (A:1-408) automated matches {Pig (Sus scrofa) [TaxId: 9823]}
qyapqtqsgrtsivhlfewrwvdialecerylgpkgfggvqvsppnenivvtnpsrpwwe
ryqpvsyklctrsgnenefrdmvtrcnnvgvriyvdavinhmcgsgaaagtgttcgsycn
pgnrefpavpysawdfndgkcktasggiesyndpyqvrdcqlvglldlalekdyvrsmia
dylnklidigvagfridaskhmwpgdikavldklhnlntnwfpagsrpfifqevidlgge
aiksseyfgngrvtefkygaklgtvvrkwsgekmsylknwgegwgfmpsdralvfvdnhd
nqrghgaggasiltfwdarlykiavgfmlahpygftrvmssyrwarnfvngedvndwigp
pnnngvikevtinadttcgndwvcehrwreirnmvwfrnvvdgepfan

Timeline for d1vaha2:

• d1vaha2 first appeared in SCOP 1.73
  
• d1vaha2 appears in SCOPe 2.05
  
• d1vaha2 appears in SCOPe 2.07
  
• d1vaha2 appears in the current release, SCOPe 2.08