SCOPe 2.05: Domain d1v8zd_: 1v8z D:

Lineage for d1v8zd_ (1v8z D:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
   consists of two similar domains related by pseudo dyad; duplication
   core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214

4. Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families)

5. Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 proteins)

6. Protein Tryptophan synthase, beta-subunit [53688] (4 species)

7. Species Pyrococcus furiosus [TaxId:2261] [142741] (2 PDB entries)
   Uniprot Q8U093 1-386

8. Domain d1v8zd_: 1v8z D: [119876]
   automated match to d2tysb_
   complexed with na, plp

Details for d1v8zd_

PDB Entry: 1v8z, 2.21 Å

PDB Description: X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus

PDB Compounds: (D:) Tryptophan synthase beta chain 1

SCOPe Domain Sequences for d1v8zd_:

Sequence, based on SEQRES records:

>d1v8zd_ c.79.1.1 (D:) Tryptophan synthase, beta-subunit {Pyrococcus furiosus [TaxId: 2261]}
mwfgefggqyvpetlieplkelekaykrfkddeefnrqlnyylktwagrptplyyakrlt
ekiggakiylkredlvhggahktnnaigqallakfmgktrliaetgagqhgvatamagal
lgmkvdiymgaedverqkmnvfrmkllganvipvnsgsrtlkdainealrdwvatfeyth
yligsvvgphpyptivrdfqsvigreakaqileaegqlpdvivacvgggsnamgifypfv
ndkkvklvgveaggkglesgkhsaslnagqvgvfhgmlsyflqdeegqikpthsiapgld
ypgvgpehaylkkiqraeyvtvtdeealkafhelsrtegiipalesahavayamklakem
srdeiiivnlsgrgdkdldivlkvsg

Sequence, based on observed residues (ATOM records):

>d1v8zd_ c.79.1.1 (D:) Tryptophan synthase, beta-subunit {Pyrococcus furiosus [TaxId: 2261]}
mwfgefggqyvpetlieplkelekaykrfkddeefnrqlnyylktwagrptplyyakrlt
ekiggakiylkredlvhggahktnnaigqallakfmgktrliaetgagqhgvatamagal
lgmkvdiymgaedverqkmnvfrmkllganvipvnsgsrtlkdainealrdwvatfeyth
yligsvvgphpyptivrdfqsvigreakaqileaegqlpdvivacvgggsnamgifypfv
ndkkvklvgveaggkglesgkhsaslnagqvgvfhgmlsyflqdeegqikpthsiapgld
ypgvgpehaylkkiqraeyvtvtdeealkafhelsrtegiipalesahavayamklakem
srdeiiivnlsgrgdkdldivlvsg

Timeline for d1v8zd_:

• d1v8zd_ first appeared in SCOP 1.73, called d1v8zd1
  
• d1v8zd_ appears in SCOPe 2.04
  
• d1v8zd_ appears in SCOPe 2.06
  
• d1v8zd_ appears in the current release, SCOPe 2.08