Lineage for d1v5ga1 (1v5g A:187-363)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 985972Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 985973Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (7 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 986002Family c.31.1.3: Pyruvate oxidase and decarboxylase, middle domain [52475] (8 proteins)
    N-terminal domain is Pyr module, and C-terminal domain is PP module of thiamin diphosphate-binding fold
  6. 986123Protein Pyruvate oxidase [52476] (2 species)
    binds FAD
  7. 986124Species Aerococcus viridans [TaxId:1377] [142122] (4 PDB entries)
  8. 986128Domain d1v5ga1: 1v5g A:187-363 [119850]
    Other proteins in same PDB: d1v5ga2, d1v5ga3
    automatically matched to 1V5E A:187-363
    complexed with fad, htl, mg

Details for d1v5ga1

PDB Entry: 1v5g (more details), 1.96 Å

PDB Description: Crystal Structure of the Reaction Intermediate between Pyruvate oxidase containing FAD and TPP, and Substrate Pyruvate
PDB Compounds: (A:) Pyruvate oxidase

SCOPe Domain Sequences for d1v5ga1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1v5ga1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
yapiapaaqdidaavellnnskrpviyagigtmghgpavqelarkikapvittgknfetf
ewdfealtgstyrvgwkpanetileadtvlfagsnfpfsevegtfrnvdnfiqididpam
lgkrhhadvailgdaalaideilnkvdaveesawwtanlknianwreyinmletkee

SCOPe Domain Coordinates for d1v5ga1:

Click to download the PDB-style file with coordinates for d1v5ga1.
(The format of our PDB-style files is described here.)

Timeline for d1v5ga1: