SCOPe 2.05: Domain d1v1ta1: 1v1t A:110-194

Lineage for d1v1ta1 (1v1t A:110-194)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (7 families)
   peptide-binding domain

5. Family b.36.1.1: PDZ domain [50157] (47 proteins)
   Pfam PF00595

6. Protein Syntenin 1 [89311] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [89312] (11 PDB entries)

8. Domain d1v1ta1: 1v1t A:110-194 [119830]
   automated match to d1obza1
   complexed with bez

Details for d1v1ta1

PDB Entry: 1v1t, 1.8 Å

PDB Description: crystal structure of the pdz tandem of human syntenin in complex with tneykv peptide

PDB Compounds: (A:) Syntenin 1

SCOPe Domain Sequences for d1v1ta1:

Sequence; same for both SEQRES and ATOM records:

>d1v1ta1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}
mdprevilckdqdgkiglrlksidngifvqlvqanspaslvglrfgdqvlqingencagw
ssdkahkvlkqafgekitmtirdrp

Timeline for d1v1ta1:

• d1v1ta1 first appeared in SCOP 1.73
  
• d1v1ta1 appears in SCOPe 2.04
  
• d1v1ta1 appears in SCOPe 2.06
  
• d1v1ta1 appears in the current release, SCOPe 2.08