SCOPe 2.06: Domain d1u9zd2: 1u9z D:156-284

Lineage for d1u9zd2 (1u9z D:156-284)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.61: PRTase-like [53270] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.61.1: PRTase-like [53271] (3 families)

5. Family c.61.1.2: Phosphoribosylpyrophosphate synthetase-like [53296] (2 proteins)
   duplication: consists of two domains of this fold

6. Protein Phosphoribosylpyrophosphate synthetase [53297] (2 species)

7. Species Methanocaldococcus jannaschii [TaxId:2190] [142562] (2 PDB entries)
   Uniprot Q58761 1-155! Uniprot Q58761 156-284

8. Domain d1u9zd2: 1u9z D:156-284 [119670]
   automated match to d1u9ya2
   complexed with amp, r5p

Details for d1u9zd2

PDB Entry: 1u9z, 2.8 Å

PDB Description: crystal structure of phosphoribosyl diphosphate synthase complexed with amp and ribose 5-phosphate

PDB Compounds: (D:) Ribose-phosphate pyrophosphokinase

SCOPe Domain Sequences for d1u9zd2:

Sequence, based on SEQRES records:

>d1u9zd2 c.61.1.2 (D:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
dpivlapdkgalefaktaskilnaeydylektrlspteiqiapktldakdrdvfivddii
stggtmatavkllkeqgakkiiaacvhpvligdalnklysagveevvgtdtylsevskvs
vaevivdll

Sequence, based on observed residues (ATOM records):

>d1u9zd2 c.61.1.2 (D:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
dpivlapdkgalefaktaskilnaeydyleiapktldakdrdvfivddiistggtmatav
kllkeqgakkiiaacvhpvligdalnklysagveevvgtdtylsevskvsvaevivdll

Timeline for d1u9zd2:

• d1u9zd2 first appeared in SCOP 1.73
  
• d1u9zd2 appears in SCOPe 2.05
  
• d1u9zd2 appears in SCOPe 2.07
  
• d1u9zd2 appears in the current release, SCOPe 2.08