SCOPe 2.08: Domain d1u7da_: 1u7d A:

Lineage for d1u7da_ (1u7d A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 proteins)
   contains a conserved all-alpha subdomain at the C-terminal extension

6. Protein Tyrosyl-tRNA synthetase (TyrRS) [52376] (6 species)

7. Species Methanococcus jannaschii [TaxId:2190] [89611] (9 PDB entries)

8. Domain d1u7da_: 1u7d A: [119615]
   automated match to d1j1ua_

Details for d1u7da_

PDB Entry: 1u7d, 2.65 Å

PDB Description: crystal structure of apo M. jannashii tyrosyl-tRNA synthetase

PDB Compounds: (A:) Tyrosyl-tRNA synthetase

SCOPe Domain Sequences for d1u7da_:

Sequence, based on SEQRES records:

>d1u7da_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Methanococcus jannaschii [TaxId: 2190]}
mdefemikrntseiiseeelrevlkkdeksayigfepsgkihlghylqikkmidlqnagf
diiilladlhaylnqkgeldeirkigdynkkvfeamglkakyvygsefqldkdytlnvyr
lalkttlkrarrsmeliaredenpkvaeviypimqvndihylgvdvavggmeqrkihmla
rellpkkvvcihnpvltgldgegkmssskgnfiavddspeeirakikkaycpagvvegnp
imeiakyfleypltikrpekfggdltvnsyeeleslfknkelhpmdlknavaeelikile
pirkrl

Sequence, based on observed residues (ATOM records):

>d1u7da_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Methanococcus jannaschii [TaxId: 2190]}
mdefemikrntseiiseeelrevlkkdeksayigfepsgkihlghylqikkmidlqnagf
diiilladlhaylnqkgeldeirkigdynkkvfeamglkakyvygsefqldkdytlnvyr
lalkttlkrarrsenpkvaeviypimqvndihylgvdvavggmeqrkihmlarellpkkv
vcihnpvltgldgekgnfiavddspeeirakikkaycpagvvegnpimeiakyfleyplt
ikrpekfggdltvnsyeeleslfknkelhpmdlknavaeelikilepirkrl

Timeline for d1u7da_:

• d1u7da_ first appeared in SCOP 1.73, called d1u7da1
  
• d1u7da_ appears in SCOPe 2.07