SCOPe 2.06: Domain d1u28b2: 1u28 B:1-143,B:327-381

Lineage for d1u28b2 (1u28 B:1-143,B:327-381)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
   3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

4. Superfamily c.23.12: Formate/glycerate dehydrogenase catalytic domain-like [52283] (3 families)

5. Family c.23.12.2: L-alanine dehydrogenase-like [52297] (2 proteins)

6. Protein Nicotinamide nucleotide transhydrogenase dI component [63963] (1 species)
   L-alanine dehydrogenase homologue

7. Species Rhodospirillum rubrum [TaxId:1085] [63964] (15 PDB entries)

8. Domain d1u28b2: 1u28 B:1-143,B:327-381 [119471]
   Other proteins in same PDB: d1u28a1, d1u28b1, d1u28c_
   automated match to d1l7db2
   complexed with gol, nad, nap

Details for d1u28b2

PDB Entry: 1u28, 2.3 Å

PDB Description: r. rubrum transhydrogenase asymmetric complex (di.nad+)2(diii.nadp+)1

PDB Compounds: (B:) NAD(P) transhydrogenase subunit alpha part 1

SCOPe Domain Sequences for d1u28b2:

Sequence, based on SEQRES records:

>d1u28b2 c.23.12.2 (B:1-143,B:327-381) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
mkiaipkerrpgedrvaispevvkklvglgfeviveqgagvgasitddaltaagatiast
aaqalsqadvvwkvqrpmtaeegtdevalikegavlmchlgaltnrpvvealtkrkitay
amelmprisraqsmdilssqsnlXvaadasplfaknllnfltphvdkdtktlvmkledet
vsgtcvtrdgaivhpaltg

Sequence, based on observed residues (ATOM records):

>d1u28b2 c.23.12.2 (B:1-143,B:327-381) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}
mkiaipkerrpgedrvaispevvkklvglgfeviveqgagvgasitddaltaagatiast
aaqalsqadvvwkvqrpmtaeegtdevalikegavlmchlgaltnrpvvealtkrkitay
amelmprisraqsmdilssqsnlXvaadasplfaknllnfltphvdkdktlvmkledetv
sgtcvtrdgaivhpaltg

Timeline for d1u28b2:

• d1u28b2 first appeared in SCOP 1.73
  
• d1u28b2 appears in SCOPe 2.05
  
• d1u28b2 appears in SCOPe 2.07
  
• d1u28b2 appears in the current release, SCOPe 2.08