Lineage for d1svda2 (1svd A:16-142)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families) (S)
    C-terminal domain is beta/alpha barrel
  5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)
  6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (13 species)
  7. Species Halothiobacillus neapolitanus [TaxId:927] [143362] (1 PDB entry)
    Uniprot O85040 16-142
  8. Domain d1svda2: 1svd A:16-142 [119058]
    Other proteins in same PDB: d1svda1, d1svdm1
    complexed with gol, so4

Details for d1svda2

PDB Entry: 1svd (more details), 1.8 Å

PDB Description: The structure of Halothiobacillus neapolitanus RuBisCo
PDB Compounds: (A:) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

SCOPe Domain Sequences for d1svda2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1svda2 d.58.9.1 (A:16-142) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
tywmpeytpldsdilacfkitpqpgvdreeaaaavaaesstgtwttvwtdlltdmdyykg
rayriedvpgddaafyafiaypidlfeegsvvnvftslvgnvfgfkavrglrledvrfpl
ayvktcg

SCOPe Domain Coordinates for d1svda2 are not available.

Timeline for d1svda2:

View in 3D
Domains from same chain:
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d1svda1
View in 3D
Domains from other chains:
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d1svdm1