SCOP 1.73: Domain d1svda1: 1svd A:143-460

Lineage for d1svda1 (1svd A:143-460)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (1 family)

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (1 protein)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)

7. Species Archaeon Halothiobacillus neapolitanus [TaxId:927] [141849] (1 PDB entry)

8. Domain d1svda1: 1svd A:143-460 [119057]
   Other proteins in same PDB: d1svda2, d1svdm1
   complexed with gol, so4

Details for d1svda1

PDB Entry: 1svd, 1.8 Å

PDB Description: The structure of Halothiobacillus neapolitanus RuBisCo

PDB Compounds: (A:) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

SCOP Domain Sequences for d1svda1:

Sequence; same for both SEQRES and ATOM records:

>d1svda1 c.1.14.1 (A:143-460) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Halothiobacillus neapolitanus [TaxId: 927]}
gpphgiqverdkmnkygrpllgctikpklglsaknygravyeclrggldftkddeninsq
pfmrwrdrflfvqdatetaeaqtgerkghylnvtaptpeemykraefakeigapiimhdy
itggftantglakwcqdngvllhihramhavidrnpnhgihfrvltkilrlsggdhlhtg
tvvgklegdrastlgwidllresfipedrsrgiffdqdwgsmpgvfavasggihvwhmpa
lvnifgddsvlqfgggtlghpwgnaagaaanrvaleacvearnqgrdiekegkeiltaaa
qhspelkiametwkeikf

Timeline for d1svda1:

• d1svda1 is new in SCOP 1.73
  
• d1svda1 appears in SCOP 1.75
  
• d1svda1 appears in the current release, SCOPe 2.08