Lineage for d1svda1 (1svd A:143-460)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2838499Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2838500Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
    N-terminal domain is alpha+beta
  6. 2838501Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)
  7. 2838578Species Halothiobacillus neapolitanus [TaxId:927] [141849] (1 PDB entry)
    Uniprot O85040 143-460
  8. 2838579Domain d1svda1: 1svd A:143-460 [119057]
    Other proteins in same PDB: d1svda2, d1svdm1
    complexed with gol, so4

Details for d1svda1

PDB Entry: 1svd (more details), 1.8 Å

PDB Description: The structure of Halothiobacillus neapolitanus RuBisCo
PDB Compounds: (A:) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

SCOPe Domain Sequences for d1svda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1svda1 c.1.14.1 (A:143-460) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}

SCOPe Domain Coordinates for d1svda1:

Click to download the PDB-style file with coordinates for d1svda1.
(The format of our PDB-style files is described here.)

Timeline for d1svda1:

View in 3D
Domains from same chain:
(mouse over for more information)
View in 3D
Domains from other chains:
(mouse over for more information)