SCOPe 2.04: Domain d1sqqb2: 1sqq B:236-439

Lineage for d1sqqb2 (1sqq B:236-439)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
   core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta

4. Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families)
   Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues

5. Family d.185.1.0: automated matches [232765] (1 protein)
   not a true family

6. Protein automated matches [232766] (2 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [254892] (1 PDB entry)

8. Domain d1sqqb2: 1sqq B:236-439 [119010]
   Other proteins in same PDB: d1sqqa1, d1sqqa2, d1sqqb1, d1sqqc1, d1sqqc2, d1sqqd1, d1sqqd2, d1sqqe1, d1sqqe2, d1sqqf1, d1sqqg_, d1sqqh_, d1sqqi_, d1sqqj_, d1sqqk1
   automated match to d2bccb2
   complexed with fes, hem, ost, uq2

Details for d1sqqb2

PDB Entry: 1sqq, 3 Å

PDB Description: crystal structure analysis of bovine bc1 with methoxy acrylate stilbene (moas)

PDB Compounds: (B:) Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor

SCOPe Domain Sequences for d1sqqb2:

Sequence; same for both SEQRES and ATOM records:

>d1sqqb2 d.185.1.0 (B:236-439) automated matches {Cow (Bos taurus) [TaxId: 9913]}
kakyhggeireqngdslvhaalvaesaaigsaeanafsvlqhvlgagphvkrgsnatssl
yqavakgvhqpfdvsafnasysdsglfgfytisqaasagdvikaaynqvktiaqgnlsnp
dvqaaknklkagylmsvessegfldevgsqalaagsytppstvlqqidavadadvinaak
kfvsgrksmaasgnlghtpfidel

Timeline for d1sqqb2:

• d1sqqb2 first appeared in SCOP 1.73
  
• d1sqqb2 appears in SCOPe 2.03
  
• d1sqqb2 appears in SCOPe 2.05
  
• d1sqqb2 appears in the current release, SCOPe 2.08