SCOPe 2.08: Domain d1rblh1: 1rbl H:148-475

Lineage for d1rblh1 (1rbl H:148-475)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)

7. Species Synechococcus sp., strain pcc 6301 [TaxId:1131] [51656] (2 PDB entries)

8. Domain d1rblh1: 1rbl H:148-475 [118597]
   Other proteins in same PDB: d1rbla2, d1rblb2, d1rblc2, d1rbld2, d1rble2, d1rblf2, d1rblg2, d1rblh2, d1rbli_, d1rblj_, d1rblk_, d1rbll_, d1rblm_, d1rbln_, d1rblo_, d1rblp_
   duplicate of 1RBL A:148-475
   complexed with cap, fmt, mg

Details for d1rblh1

PDB Entry: 1rbl, 2.2 Å

PDB Description: structure determination and refinement of ribulose 1,5 bisphosphate carboxylase(slash)oxygenase from synechococcus pcc6301

PDB Compounds: (H:) ribulose 1,5 bisphosphate carboxylase/oxygenase (large chain)

SCOPe Domain Sequences for d1rblh1:

Sequence; same for both SEQRES and ATOM records:

>d1rblh1 c.1.14.1 (H:148-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
fqgpphgiqverdllnkygrpmlgctikpklglsaknygravyeclrggldftkddenin
sqpfqrwrdrflfvadaihksqaetgeikghylnvtaptceemmkraefakelgmpiimh
dfltagftanttlakwcrdngvllhihramhavidrqrnhgihfrvlakclrlsggdhlh
sgtvvgklegdkastlgfvdlmredhieadrsrgvfftqdwasmpgvlpvasggihvwhm
palveifgddsvlqfgggtlghpwgnapgatanrvaleacvqarnegrdlyreggdilre
agkwspelaaaldlwkeikfefetmdkl

Timeline for d1rblh1:

• d1rblh1 first appeared in SCOP 1.73
  
• d1rblh1 appears in SCOPe 2.07