Lineage for Species: Agrobacterium tumefaciens [TaxId: 358]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2172847Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2173071Family d.58.4.13: NIPSNAP [117943] (2 protein domains)
    Pfam PF07978
  6. 2173072Protein Hypothetical protein Atu4242 [117944] (1 species)
  7. 2173073Species Agrobacterium tumefaciens [TaxId:358] [117945] (2 PDB entries)
    Uniprot Q8U857

PDB entries in Species: Agrobacterium tumefaciens [TaxId: 358]:

  1. Domain(s) for 1vqs:
    1. 2173074Domain d1vqsa1: 1vqs A:1-104 [114019]
      Other proteins in same PDB: d1vqsa2, d1vqsb2, d1vqsc2, d1vqsd2, d1vqse2
      structural genomics target
      complexed with mpd, so4
    2. 2173075Domain d1vqsb1: 1vqs B:1-104 [114020]
      Other proteins in same PDB: d1vqsa2, d1vqsb2, d1vqsc2, d1vqsd2, d1vqse2
      structural genomics target
      complexed with mpd, so4
    3. 2173076Domain d1vqsc1: 1vqs C:1-104 [114021]
      Other proteins in same PDB: d1vqsa2, d1vqsb2, d1vqsc2, d1vqsd2, d1vqse2
      structural genomics target
      complexed with mpd, so4
    4. 2173077Domain d1vqsd1: 1vqs D:1-104 [114022]
      Other proteins in same PDB: d1vqsa2, d1vqsb2, d1vqsc2, d1vqsd2, d1vqse2
      structural genomics target
      complexed with mpd, so4
    5. 2173078Domain d1vqse1: 1vqs E:1-104 [114023]
      Other proteins in same PDB: d1vqsa2, d1vqsb2, d1vqsc2, d1vqsd2, d1vqse2
      structural genomics target
      complexed with mpd, so4
  2. Domain(s) for 2ap6:
    1. 2173079Domain d2ap6a1: 2ap6 A:1-103 [127111]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
    2. 2173080Domain d2ap6b2: 2ap6 B:1-103 [127112]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    3. 2173081Domain d2ap6c2: 2ap6 C:1-103 [127113]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    4. 2173082Domain d2ap6d2: 2ap6 D:1-103 [127114]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    5. 2173083Domain d2ap6e2: 2ap6 E:1-103 [127115]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    6. 2173084Domain d2ap6f2: 2ap6 F:1-103 [127116]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    7. 2173085Domain d2ap6g2: 2ap6 G:1-103 [127117]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_
    8. 2173086Domain d2ap6h2: 2ap6 H:1-103 [127118]
      Other proteins in same PDB: d2ap6a2, d2ap6b3, d2ap6c3, d2ap6d3, d2ap6e3, d2ap6f3, d2ap6g3, d2ap6h3
      automated match to d1vqsa_

More info for Species Agrobacterium tumefaciens [TaxId:358] from d.58.4.13 Hypothetical protein Atu4242

Timeline for Species Agrobacterium tumefaciens [TaxId:358] from d.58.4.13 Hypothetical protein Atu4242: