SCOPe 2.08: Protein: D-lysine 5,6-aminomutase alpha subunit, KamD

Lineage for Protein: D-lysine 5,6-aminomutase alpha subunit, KamD

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.19: Cobalamin (vitamin B12)-dependent enzymes [51703] (4 families)
Family c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD [117392] (1 protein)
most similar to the glutamate mutase subunit; contains second cofactor, PLP
automatically mapped to Pfam PF09043
Protein D-lysine 5,6-aminomutase alpha subunit, KamD [117393] (1 species)

Species:

Clostridium sticklandii [TaxId:1511] [117394] (1 PDB entry)
Uniprot Q9ZFE6
- Domain for 1xrs:
  - Domain d1xrsa_: 1xrs A: [115883]
    Other proteins in same PDB: d1xrsb1, d1xrsb2
    complexed with 5ad, b12, plp

More info for Protein D-lysine 5,6-aminomutase alpha subunit, KamD from c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD

Timeline for Protein D-lysine 5,6-aminomutase alpha subunit, KamD from c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD:

Protein D-lysine 5,6-aminomutase alpha subunit, KamD from c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD first appeared in SCOP 1.71
Protein D-lysine 5,6-aminomutase alpha subunit, KamD from c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD appears in SCOPe 2.07