SCOPe 2.05: Family a.35.1.7: CUT domain

Lineage for Family a.35.1.7: CUT domain

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
   core: 4 helices; folded leaf, closed

4. Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families)

5. Family a.35.1.7: CUT domain [116891] (5 proteins)
   Pfam PF02376

Proteins:

1. DNA-binding protein SATB1 [140518] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [140519] (1 PDB entry)
     Uniprot Q01826 368-455

2. DNA-binding protein SATB2 [116894] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [116895] (2 PDB entries)
     Uniprot Q9UPW6 350-437; the structure of a homedomain (615-672) is also known: 1WI3

3. Hepatocyte nuclear factor 6 [116896] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [116897] (1 PDB entry)
     Uniprot O08755 291-437

4. Homeobox protein Cux-2, CUTL2 [116892] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [116893] (3 PDB entries)
     Uniprot O14529 825-912; 966-1063

5. automated matches [190367] (2 species)
   not a true protein

   1. Species Human (Homo sapiens) [TaxId:9606] [187202] (2 PDB entries)

   2. Species Norway rat (Rattus norvegicus) [TaxId:10116] [230635] (1 PDB entry)

More info for Family a.35.1.7: CUT domain

Timeline for Family a.35.1.7: CUT domain:

• Family a.35.1.7: CUT domain first appeared in SCOP 1.71
  
• Family a.35.1.7: CUT domain appears in SCOPe 2.04
  
• Family a.35.1.7: CUT domain appears in SCOPe 2.06
  
• Family a.35.1.7: CUT domain appears in the current release, SCOPe 2.08