Lineage for d1ygdb_ (1ygd B:)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2685878Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 2685879Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 2685963Family a.1.1.2: Globins [46463] (27 proteins)
    Heme-binding protein
  6. 2687001Protein Hemoglobin, beta-chain [46500] (26 species)
  7. 2687135Species Human (Homo sapiens) [TaxId:9606] [46501] (289 PDB entries)
    Uniprot P68871
  8. 2687594Domain d1ygdb_: 1ygd B: [116687]
    Other proteins in same PDB: d1ygda_, d1ygdc_
    complexed with hem, oxy, znh

Details for d1ygdb_

PDB Entry: 1ygd (more details), 2.73 Å

PDB Description: t-to-t(high) quaternary transitions in human hemoglobin: betaw37e alpha zinc beta oxy (10 test sets)
PDB Compounds: (B:) hemoglobin beta chain

SCOPe Domain Sequences for d1ygdb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ygdb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Human (Homo sapiens) [TaxId: 9606]}
mhltpeeksavtalwgkvnvdevggealgrllvvypetqrffesfgdlstpdavmgnpkv
kahgkkvlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
eftppvqaayqkvvagvanalahkyh

SCOPe Domain Coordinates for d1ygdb_:

Click to download the PDB-style file with coordinates for d1ygdb_.
(The format of our PDB-style files is described here.)

Timeline for d1ygdb_: