Class a: All alpha proteins [46456] (286 folds) |
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies) core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down |
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) contains a small beta-sheet (wing) |
Family a.4.5.61: PadR-like [116807] (3 proteins) Pfam PF03551; related to the MarR-like family (Pfam PF01047) |
Protein Hypothetical protein AphA [116810] (1 species) contains extra C-terminal dimerisation domain |
Species Vibrio cholerae [TaxId:666] [116811] (1 PDB entry) Uniprot Q9X399 # "winged helix" domain: 1-87, dimerisation domain: 91-179 |
Domain d1yg2a_: 1yg2 A: [116681] Structural genomics target |
PDB Entry: 1yg2 (more details), 2.2 Å
SCOPe Domain Sequences for d1yg2a_:
Sequence, based on SEQRES records: (download)
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]} slphviltvlstrdatgyditkefsasigyfwkashqqvyrelnkmgeqglvtcvlepqe gkpdrkvysitqagrsalgewfdqptahptvrdefsaklmacsvqsaepyrlqlaelvee srklvahyqeieaayyanpavldkqqrlerltlrrnllvrqawiqwadevlaelnama
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]} slphviltvlstrdatgyditkefsasigyfwkashqqvyrelnkmgeqglvtcvlevys itqagrsalgewfdqptahptvrdefsaklmacsvqsaepyrlqlaelveesrklvahyq eieaayyanpavldkqqrlerltlrrnllvrqawiqwadevlaelnama
Timeline for d1yg2a_: