Lineage for d1ycnb1 (1ycn B:2-317)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2000010Fold a.65: Annexin [47873] (1 superfamily)
    5 helices; folded leaf, closed
  4. 2000011Superfamily a.65.1: Annexin [47874] (2 families) (S)
    duplication: consists of four domains of the same fold
  5. 2000012Family a.65.1.1: Annexin [47875] (10 protein domains)
  6. 2000102Protein Plant annexin-like protein [47892] (2 species)
  7. 2000106Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [116946] (2 PDB entries)
    Uniprot Q9SYT0
  8. 2000110Domain d1ycnb1: 1ycn B:2-317 [116613]
    Other proteins in same PDB: d1ycna2, d1ycnb2
    Structural genomics target

Details for d1ycnb1

PDB Entry: 1ycn (more details), 2.51 Å

PDB Description: x-ray structure of annexin from arabidopsis thaliana gene at1g35720
PDB Compounds: (B:) putative Ca2+-dependent membrane-binding protein annexin

SCOPe Domain Sequences for d1ycnb1:

Sequence, based on SEQRES records: (download)

>d1ycnb1 a.65.1.1 (B:2-317) Plant annexin-like protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
atlkvsdsvpapsddaeqlrtafegwgtnedliisilahrsaeqrkvirqayhetygedl
lktldkelsndferaillwtlepgerdallaneatkrwtssnqvlmevactrtstqllha
rqayharykksleedvahhttgdfrkllvslvtsyryegdevnmtlakqeaklvhekikd
khyndedvirilstrskaqinatfnryqddhgeeilksleegddddkflallrstiqclt
rpelyfvdvlrsainktgtdegaltrivttraeidlkvigeeyqrrnsiplekaitkdtr
gdyekmlvallgedda

Sequence, based on observed residues (ATOM records): (download)

>d1ycnb1 a.65.1.1 (B:2-317) Plant annexin-like protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
atlkvsdsvpapsddaeqlrtaedliisilahrsaeqrkvirqayhetygedllktldsn
dferaillwtlepgerdallaneatkrwtssnqvlmevactrtstqllharqayharykk
sleedvahhttgdfrkllvslvtsyryegdevnmtlakqeaklvhekikdkhyndedvir
ilstrskaqinatfnryqddhgeeilksleegddddkflallrstiqcltrpelyfvdvl
rsainktgtdegaltrivttraeidlkvigeeyqrrnsiplekaitkdtrgdyekmlval
lgedda

SCOPe Domain Coordinates for d1ycnb1:

Click to download the PDB-style file with coordinates for d1ycnb1.
(The format of our PDB-style files is described here.)

Timeline for d1ycnb1:

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Domains from same chain:
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d1ycnb2