SCOPe 2.03: Domain d1y6ja2: 1y6j A:149-317

Lineage for d1y6ja2 (1y6j A:149-317)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
   unusual fold, defines family

4. Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families)

5. Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins)
   N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
   automatically mapped to Pfam PF02866

6. Protein Lactate dehydrogenase [56339] (18 species)

7. Species Clostridium thermocellum [TaxId:1515] [118160] (1 PDB entry)
   Uniprot Q4CDK5

8. Domain d1y6ja2: 1y6j A:149-317 [116508]
   Other proteins in same PDB: d1y6ja1
   Structural genomics target

Details for d1y6ja2

PDB Entry: 1y6j, 3.01 Å

PDB Description: L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135

PDB Compounds: (A:) l-lactate dehydrogenase

SCOPe Domain Sequences for d1y6ja2:

Sequence, based on SEQRES records:

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}
tvldsirfryllseklgvdvknvhgyiigehgdsqlplwscthiagknineyiddpkcnf
teedkkkiaedvktagatiiknkgatyygiavsintivetllknqntirtvgtvingmyg
iedvaislpsivnsegvqevlqfnltpeeeealrfsaeqvkkvlnevkn

Sequence, based on observed residues (ATOM records):

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}
tvldsirfryllseklgvdvknvhgyiigehgdsqlplwscthiagknineydkkkiaed
vktagatiiknkgatyygiavsintivetllknqntirtvgtvingmygiedvaislpsi
vnsegvqevlqfnltpeeeealrfsaeqvkkvlnevkn

Timeline for d1y6ja2:

• d1y6ja2 first appeared in SCOP 1.71
  
• d1y6ja2 appears in SCOPe 2.02
  
• d1y6ja2 appears in SCOPe 2.04
  
• d1y6ja2 appears in the current release, SCOPe 2.08