Lineage for d1y65a1 (1y65 A:2-329)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2438500Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2440705Family c.1.8.7: NagZ-like [51553] (4 proteins)
    Pfam PF00933; Glycosyl hydrolase family 3 domain
    Some members have reversed beta strand compared to other members of fold
  6. 2440738Protein Beta-hexosaminidase NagZ [117370] (1 species)
  7. 2440739Species Vibrio cholerae [TaxId:666] [117371] (3 PDB entries)
    Uniprot Q9KU37
  8. 2440742Domain d1y65a1: 1y65 A:2-329 [116495]
    Other proteins in same PDB: d1y65a2
    complexed with nag

Details for d1y65a1

PDB Entry: 1y65 (more details), 1.85 Å

PDB Description: crystal structure of beta-hexosaminidase from vibrio cholerae in complex with n-acetyl-d-glucosamine to a resolution of 1.85
PDB Compounds: (A:) Beta-hexosaminidase

SCOPe Domain Sequences for d1y65a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1y65a1 c.1.8.7 (A:2-329) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]}

SCOPe Domain Coordinates for d1y65a1:

Click to download the PDB-style file with coordinates for d1y65a1.
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Timeline for d1y65a1:

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