SCOP 1.71: Domain d1y28a_: 1y28 A:

Lineage for d1y28a_ (1y28 A:)

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.110: Profilin-like [55769] (7 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (6 families)
   alpha-beta(2)-alpha(2)-beta(3)

5. Family d.110.3.2: Heme-binding PAS domain [55789] (2 proteins)

6. Protein Histidine kinase FixL heme domain [55790] (2 species)

7. Species Bradyrhizobium japonicum [TaxId:375] [55792] (9 PDB entries)

8. Domain d1y28a_: 1y28 A: [116399]
   complexed with hem; mutant

Details for d1y28a_

PDB Entry: 1y28, 2.1 Å

PDB Description: crystal structure of the r220a metbjfixl heme domain

SCOP Domain Sequences for d1y28a_:

Sequence; same for both SEQRES and ATOM records:

>d1y28a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Bradyrhizobium japonicum}
ipdamividghgiiqlfstaaerlfgwseleaigqnvnilmpepdrsrhdsyisryrtts
dphiigigaivtgkrrdgttfpmhlsigemqsggepyftgfvrdltehqqtqarlqelq

Timeline for d1y28a_:

• d1y28a_ is new in SCOP 1.71
  
• d1y28a_ appears in SCOP 1.73
  
• d1y28a_ appears in the current release, SCOPe 2.08