Lineage for d1xzpb1 (1xzp B:1-117)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2565288Fold d.250: Folate-binding domain [103024] (1 superfamily)
    duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
  4. 2565289Superfamily d.250.1: Folate-binding domain [103025] (2 families) (S)
    some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase
  5. 2565328Family d.250.1.2: TrmE formyl-THF-binding domain [117997] (1 protein)
    dimeric biological unit; one subunit domain corresponds to one "unswapped" subdomain of the other family
    automatically mapped to Pfam PF10396
  6. 2565329Protein TrmE formyl-THF-binding domain [117998] (1 species)
  7. 2565330Species Thermotoga maritima [TaxId:2336] [117999] (2 PDB entries)
    Uniprot Q9WYA4
  8. 2565332Domain d1xzpb1: 1xzp B:1-117 [116257]
    Other proteins in same PDB: d1xzpa1, d1xzpa2, d1xzpa4, d1xzpb2
    complexed with so4

Details for d1xzpb1

PDB Entry: 1xzp (more details), 2.3 Å

PDB Description: Structure of the GTP-binding protein TrmE from Thermotoga maritima
PDB Compounds: (B:) Probable tRNA modification GTPase trmE

SCOPe Domain Sequences for d1xzpb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xzpb1 d.250.1.2 (B:1-117) TrmE formyl-THF-binding domain {Thermotoga maritima [TaxId: 2336]}
mdtivavatppgkgaiailrlsgpdswkivqkhlrtrskivprkaihgwihengedvdev
vvvfykspksytgedmvevmchggplvvkklldlflksgarmaepgeftkraflngk

SCOPe Domain Coordinates for d1xzpb1:

Click to download the PDB-style file with coordinates for d1xzpb1.
(The format of our PDB-style files is described here.)

Timeline for d1xzpb1: