SCOPe 2.04: Domain d1xzpa3: 1xzp A:1-117

Lineage for d1xzpa3 (1xzp A:1-117)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.250: Folate-binding domain [103024] (1 superfamily)
   duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands

4. Superfamily d.250.1: Folate-binding domain [103025] (2 families)
   some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase

5. Family d.250.1.2: TrmE formyl-THF-binding domain [117997] (1 protein)
   dimeric biological unit; one subunit domain corresponds to one "unswapped" subdomain of the other family
   automatically mapped to Pfam PF10396

6. Protein TrmE formyl-THF-binding domain [117998] (1 species)

7. Species Thermotoga maritima [TaxId:2336] [117999] (2 PDB entries)
   Uniprot Q9WYA4

8. Domain d1xzpa3: 1xzp A:1-117 [116256]
   Other proteins in same PDB: d1xzpa1, d1xzpa2
   complexed with so4

Details for d1xzpa3

PDB Entry: 1xzp, 2.3 Å

PDB Description: Structure of the GTP-binding protein TrmE from Thermotoga maritima

PDB Compounds: (A:) Probable tRNA modification GTPase trmE

SCOPe Domain Sequences for d1xzpa3:

Sequence; same for both SEQRES and ATOM records:

>d1xzpa3 d.250.1.2 (A:1-117) TrmE formyl-THF-binding domain {Thermotoga maritima [TaxId: 2336]}
mdtivavatppgkgaiailrlsgpdswkivqkhlrtrskivprkaihgwihengedvdev
vvvfykspksytgedmvevmchggplvvkklldlflksgarmaepgeftkraflngk

Timeline for d1xzpa3:

• d1xzpa3 first appeared in SCOP 1.71
  
• d1xzpa3 appears in SCOPe 2.03
  
• d1xzpa3 appears in SCOPe 2.05
  
• d1xzpa3 appears in the current release, SCOPe 2.08