SCOPe 2.08: Domain d1xw8a1: 1xw8 A:1-244

Lineage for d1xw8a1 (1xw8 A:1-244)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
   variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands

4. Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families)
   in the different families beta-barrels are similarly distorted but may vary in the number of strands

5. Family c.6.2.5: LamB/YcsF-like [117449] (3 proteins)
   Pfam PF03746

6. Protein Hypothetical protein YbgL [117450] (1 species)

7. Species Escherichia coli [TaxId:562] [117451] (1 PDB entry)
   Uniprot P75746

8. Domain d1xw8a1: 1xw8 A:1-244 [116111]
   Other proteins in same PDB: d1xw8a2

Details for d1xw8a1

PDB Entry: 1xw8, 2 Å

PDB Description: X-ray structure of putative lactam utilization protein YBGL. Northeast Structural Genomics Consortium target ET90.

PDB Compounds: (A:) UPF0271 protein ybgL

SCOPe Domain Sequences for d1xw8a1:

Sequence, based on SEQRES records:

>d1xw8a1 c.6.2.5 (A:1-244) Hypothetical protein YbgL {Escherichia coli [TaxId: 562]}
mkidlnadlgegcasdaelltlvssaniacgfhagdaqimqacvreaikngvaigahpsf
pdrenfgrsamqlppetvyaqtlyqigalatiaraqggvmrhvkphgmlynqaakeaqla
daiaravyacdpalilvglagseliragkqyglttreevfadrgyqadgslvprsqsgal
ieneeqalaqtlemvqhgrvksitgewatvaaqtvclhgdgehalafarrlrsafaekgi
vvaa

Sequence, based on observed residues (ATOM records):

>d1xw8a1 c.6.2.5 (A:1-244) Hypothetical protein YbgL {Escherichia coli [TaxId: 562]}
mkidlnadlgegcasdaelltlvssaniacgfhagdaqimqacvreaikngvaigahpsf
psamqlppetvyaqtlyqigalatiaraqggvmrhvkphgmlynqaakeaqladaiarav
yacdpalilvglagseliragkqyglttreevfadrgyqadgslvprsqsgeeqalaqtl
emvqhgrvksitgewatvaaqtvclhgdghalafarrlrsafivvaa

Timeline for d1xw8a1:

• d1xw8a1 first appeared in SCOP 1.71, called d1xw8a_
  
• d1xw8a1 appears in SCOPe 2.07