SCOP 1.73: Domain d1xrsa_: 1xrs A:

Lineage for d1xrsa_ (1xrs A:)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.19: Cobalamin (vitamin B12)-dependent enzymes [51703] (4 families)

5. Family c.1.19.4: D-lysine 5,6-aminomutase alpha subunit, KamD [117392] (1 protein)
   most similar to the glutamate mutase subunit; contains second cofactor, PLP

6. Protein D-lysine 5,6-aminomutase alpha subunit, KamD [117393] (1 species)

7. Species Clostridium sticklandii [TaxId:1511] [117394] (1 PDB entry)

8. Domain d1xrsa_: 1xrs A: [115883]
   Other proteins in same PDB: d1xrsb1, d1xrsb2
   complexed with 5ad, b12, plp

Details for d1xrsa_

PDB Entry: 1xrs, 2.8 Å

PDB Description: crystal structure of lysine 5,6-aminomutase in complex with plp, cobalamin, and 5'-deoxyadenosine

PDB Compounds: (A:) D-lysine 5,6-aminomutase alpha subunit

SCOP Domain Sequences for d1xrsa_:

Sequence; same for both SEQRES and ATOM records:

>d1xrsa_ c.1.19.4 (A:) D-lysine 5,6-aminomutase alpha subunit, KamD {Clostridium sticklandii [TaxId: 1511]}
mesklnldfnlvekarakakaiaidtqefiekhttvtveravcrllgidgvdtdevplpn
ivvdhikennglnlgaamyianavlntgktpqeiaqaisageldltklpmkdlfevktka
lsmaketvekiknnrsiresrfeeygdksgpllyvivatgniyeditqavaaakqgadvi
avirttgqslldyvpygattegfggtyatqenfrlmrealdkvgaevgkyirlcnycsgl
cmpeiaamgaierldvmlndalygilfrdinmqrtmidqnfsriingfagviintgedny
lttadafeeahtvlasqfineqfallaglpeeqmglghafemdpelkngflyelsqaqma
reifpkaplkympptkfmtgnifkghiqdalfnmvtimtnqrihllgmltealhtpfmsd
ralsienaqyifnnmesiseeiqfkedgliqkragfvlekanelleeieqlglfdtlekg
ifggvkrpkdggkglngvvskdenyynpfvelmlnk

Timeline for d1xrsa_:

• d1xrsa_ first appeared in SCOP 1.71
  
• d1xrsa_ appears in SCOP 1.75
  
• d1xrsa_ appears in the current release, SCOPe 2.08