Lineage for d1xpud2 (1xpu D:48-126)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 558996Fold b.40: OB-fold [50198] (10 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 559685Superfamily b.40.4: Nucleic acid-binding proteins [50249] (13 families) (S)
  5. 559965Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (22 proteins)
    barrel, closed; n=5, S=8
  6. 560063Protein Rho termination factor, RNA-binding domain [68910] (1 species)
  7. 560064Species Escherichia coli [TaxId:562] [68911] (8 PDB entries)
  8. 560074Domain d1xpud2: 1xpu D:48-126 [115800]
    Other proteins in same PDB: d1xpua1, d1xpua3, d1xpub1, d1xpub3, d1xpuc1, d1xpuc3, d1xpud1, d1xpud3, d1xpue1, d1xpue3, d1xpuf1, d1xpuf3

Details for d1xpud2

PDB Entry: 1xpu (more details), 3.05 Å

PDB Description: Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)

SCOP Domain Sequences for d1xpud2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xpud2 b.40.4.5 (D:48-126) Rho termination factor, RNA-binding domain {Escherichia coli}
difgdgvleilqdgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkeg
eryfallkvnevnfdkpen

SCOP Domain Coordinates for d1xpud2:

Click to download the PDB-style file with coordinates for d1xpud2.
(The format of our PDB-style files is described here.)

Timeline for d1xpud2: