SCOPe 2.06: Domain d1xmxa1: 1xmx A:1-383

Lineage for d1xmxa1 (1xmx A:1-383)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (36 families)

5. Family c.52.1.26: Hypothetical protein VC1899 [117625] (1 protein)
   contains 2 extra N-terminal domains; d1: [alpha/beta; 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214567; strand 6 is antiparallel to the rest; topological similarity to the Formyltransferase fold (53327)]; d2: [distorted "winged helix" fold (46785)]
   automatically mapped to Pfam PF09002

6. Protein Hypothetical protein VC1899 [117626] (1 species)

7. Species Vibrio cholerae [TaxId:666] [117627] (1 PDB entry)
   Uniprot Q9KQU9 # d1 (1-156); d2 (161-249); putative catalytic domain d3 (250-383)

8. Domain d1xmxa1: 1xmx A:1-383 [115568]
   Other proteins in same PDB: d1xmxa2
   Structural genomics target
   complexed with fmt, gol, mg

Details for d1xmxa1

PDB Entry: 1xmx, 2.1 Å

PDB Description: crystal structure of protein vc1899 from vibrio cholerae

PDB Compounds: (A:) hypothetical protein VC1899

SCOPe Domain Sequences for d1xmxa1:

Sequence, based on SEQRES records:

>d1xmxa1 c.52.1.26 (A:1-383) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]}
maihvgiidqdpvrlvtplldhrtvsrhiifigdhtqtviyqrlsdvlnkrnistdffei
pagsntsaiksairelaetlkargeevkfnascglrhrllsayevfrsyhwpifvvepns
dclcwlypegnndtqvqdritiadyltifgargefnehqlspqldqqlyqlgerwasnal
elgpglatlnylattcrkeqkldvelsdkqqgyrelnlllsdlveakiasyengiltfin
eearrfangewletlvhstvkqiqddmptiqdrslnvqvyrqlgerevrneldvatvvnn
klhiiecktkgmrddgddtlykleslrdllgglqaramlvsfrplrhnditraedlglal
igpdelkdlkthltqwfkaaggn

Sequence, based on observed residues (ATOM records):

>d1xmxa1 c.52.1.26 (A:1-383) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]}
maihvgiidqdpvrlvtplldhrtvsrhiifigdhtqtviyqrlsdvlnkrnistdffei
pagsntsaiksairelaetlkargeevkfnascglrhrllsayevfrsyhwpifvvepns
dclcwlypegnndtqvqdritiadyltifgargefnspqldqqlyqlgerwasnalelgp
glatlnylattcrkeqkldvelsdkqqgyrelnlllsdlveakiasyengiltfineear
rfangewletlvhstvkqiqddmptiqdrslnvqvyrqlgerevrneldvatvvnnklhi
iecktkgmrdgddtlykleslrdllgglqaramlvsfrplrhnditraedlglaligpde
lkdlkthltqwfkaaggn

Timeline for d1xmxa1:

• d1xmxa1 first appeared in SCOP 1.71, called d1xmxa_
  
• d1xmxa1 was called d1xmxa_ in SCOPe 2.05
  
• d1xmxa1 appears in SCOPe 2.07
  
• d1xmxa1 appears in the current release, SCOPe 2.08