SCOPe 2.06: Domain d1xkna1: 1xkn A:2-347

Lineage for d1xkna1 (1xkn A:2-347)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
   Pfam PF04371; functionally related to the amidinotransferase, similar active site

6. Protein Putative peptidyl-arginine deiminase [111158] (3 species)

7. Species Chlorobium tepidum [TaxId:1097] [118089] (1 PDB entry)
   Uniprot Q8KCB6

8. Domain d1xkna1: 1xkn A:2-347 [115414]
   Other proteins in same PDB: d1xkna2
   Structural genomics target
   complexed with cl, na

Details for d1xkna1

PDB Entry: 1xkn, 1.6 Å

PDB Description: crystal structure of the putative peptidyl-arginine deiminase from chlorobium tepidum, nesg target ctr21

PDB Compounds: (A:) putative peptidyl-arginine deiminase

SCOPe Domain Sequences for d1xkna1:

Sequence; same for both SEQRES and ATOM records:

>d1xkna1 d.126.1.6 (A:2-347) Putative peptidyl-arginine deiminase {Chlorobium tepidum [TaxId: 1097]}
septyfmppewaphastwlswphkleswpgkfepvpavfaelayqlsrsetvninvldda
meaqarellkerdpegkyaerivfhriptndawcrdhgpnyvirtqdgrrdkvimnweyn
awggkyepydddnavpervakaqglpmvstgmvleggaidvngagllltttacllnpnrn
pslgkaeieaqlrrylgiekvlwlgdgiagddtdghvddmarfvnentvviaveedpede
nykplrenyellktmtgldgkplnivklpmpepvyydgerlpasyanfyiantvvlvpty
rcprdqqaidilqqcfpkrevvgidcsdliwglgaihcvtheepam

Timeline for d1xkna1:

• d1xkna1 first appeared in SCOP 1.71, called d1xkna_
  
• d1xkna1 was called d1xkna_ in SCOPe 2.05
  
• d1xkna1 appears in SCOPe 2.07
  
• d1xkna1 appears in the current release, SCOPe 2.08