SCOPe 2.07: Domain d1xfod2: 1xfo D:6-72,D:164-353

Lineage for d1xfod2 (1xfo D:6-72,D:164-353)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families)
   core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest

5. Family c.56.5.4: Bacterial dinuclear zinc exopeptidases [53204] (18 proteins)

6. Protein Frv operon protein FrvX, catalytic domain [117659] (1 species)

7. Species Pyrococcus horikoshii [TaxId:53953] [117660] (3 PDB entries)
   Uniprot O59196 # PH1527

8. Domain d1xfod2: 1xfo D:6-72,D:164-353 [115272]
   Other proteins in same PDB: d1xfoa1, d1xfoa3, d1xfob1, d1xfoc1, d1xfod1
   complexed with zn

Details for d1xfod2

PDB Entry: 1xfo, 1.96 Å

PDB Description: Crystal Structure of an archaeal aminopeptidase

PDB Compounds: (D:) Frv operon protein FrvX

SCOPe Domain Sequences for d1xfod2:

Sequence; same for both SEQRES and ATOM records:

>d1xfod2 c.56.5.4 (D:6-72,D:164-353) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
mvdyellkkvveapgvsgyeflgirdvvieeikdyvdevkvdklgnviahkkgegpkvmi
aahmdqiXwdgrlerlgkhrfvsiafddriavytilevakqlkdakadvyfvatvqeevg
lrgartsafgiepdygfaidvtiaadipgtpehkqvthlgkgtaikimdrsvichptivr
wleelakkheipyqleillgggtdagaihltkagvptgalsvparyihsntevvderdvd
atvelmtkalenihelki

Timeline for d1xfod2:

• d1xfod2 first appeared in SCOP 1.71
  
• d1xfod2 appears in SCOPe 2.06
  
• d1xfod2 appears in the current release, SCOPe 2.08