Lineage for d1xdke_ (1xdk E:)

  1. Root: SCOP 1.71
  2. 530466Class a: All alpha proteins [46456] (226 folds)
  3. 543419Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 543420Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family) (S)
  5. 543421Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)
  6. 543673Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)
  7. 543674Species Human (Homo sapiens) [TaxId:9606] [48511] (14 PDB entries)
  8. 543702Domain d1xdke_: 1xdk E: [115166]
    Other proteins in same PDB: d1xdkb_, d1xdkf_
    complexed with co-activator peptide
    complexed with rea

Details for d1xdke_

PDB Entry: 1xdk (more details), 2.9 Å

PDB Description: crystal structure of the rarbeta/rxralpha ligand binding domain heterodimer in complex with 9-cis retinoic acid and a fragment of the trap220 coactivator

SCOP Domain Sequences for d1xdke_:

Sequence, based on SEQRES records: (download)

>d1xdke_ a.123.1.1 (E:) Retinoid-X receptor alpha (RXR-alpha) {Human (Homo sapiens)}
anedmpvekileaelavepktetyveanmglnpsspndpvtnicqaadkqlftlvewakr
iphfselplddqvillragwnelliasfshrsiavkdgillatglhvhrnsahsagvgai
fdrvltelvskmrdmqmdktelgclraivlfnpdskglsnpaevealrekvyasleayck
hkypeqpgrfaklllrlpalrsiglkclehlfffkligdtpidtflmemleap

Sequence, based on observed residues (ATOM records): (download)

>d1xdke_ a.123.1.1 (E:) Retinoid-X receptor alpha (RXR-alpha) {Human (Homo sapiens)}
anedmpvekileaelaveppndpvtnicqaadkqlftlvewakriphfselplddqvill
ragwnelliasfshrsiavkdgillatglhvhrnsahsagvgaifdrvltelvskmrdmq
mdktelgclraivlfnpdskglsnpaevealrekvyasleayckhkypeqpgrfaklllr
lpalrsiglkclehlfffkligdtpidtflmemleap

SCOP Domain Coordinates for d1xdke_:

Click to download the PDB-style file with coordinates for d1xdke_.
(The format of our PDB-style files is described here.)

Timeline for d1xdke_: