SCOPe 2.08: Domain d1wdde1: 1wdd E:151-475

Lineage for d1wdde1 (1wdd E:151-475)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [117390] (5 PDB entries)
   Uniprot P12089

8. Domain d1wdde1: 1wdd E:151-475 [114530]
   Other proteins in same PDB: d1wdda2, d1wdde2, d1wdds_, d1wddw_
   complexed with cap, gol, mg

Details for d1wdde1

PDB Entry: 1wdd, 1.35 Å

PDB Description: Crystal Structure of Activated Rice Rubisco Complexed with 2-Carboxyarabinitol-1,5-bisphosphate

PDB Compounds: (E:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d1wdde1:

Sequence; same for both SEQRES and ATOM records:

>d1wdde1 c.1.14.1 (E:151-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
pphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsqp
fmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdyl
tggftantslahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihagt
vvgklegeremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpal
teifgddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiirsack
wspelaaaceiwkaikfefepvdkl

Timeline for d1wdde1:

• d1wdde1 first appeared in SCOP 1.71
  
• d1wdde1 appears in SCOPe 2.07