SCOPe 2.08: Domain d1w48b_: 1w48 B:

Lineage for d1w48b_ (1w48 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (22 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein NTPase P4 [117541] (1 species)
   contains extra N-terminal subdomain (~100 residues): [contains pseudo beta-barrel]

7. Species Bacteriophage phi-12 [TaxId:161736] [117542] (10 PDB entries)
   Uniprot Q94M05

8. Domain d1w48b_: 1w48 B: [114157]
   protein/RNA complex; complexed with apc
   has additional subdomain(s) that are not in the common domain

Details for d1w48b_

PDB Entry: 1w48, 2.3 Å

PDB Description: p4 protein from bacteriophage phi12 in complex with ampcpp

PDB Compounds: (B:) ntpase p4

SCOPe Domain Sequences for d1w48b_:

Sequence, based on SEQRES records:

>d1w48b_ c.37.1.11 (B:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
mihlydaksfaklraaqyaafhtdapgswfdhtsgvlesvedgtpvlaigvesgdaivfd
knaqrivaykeksvkaedgsvsvvqvengfmkqghrgwlvdltgelvgcspvvaefgghr
yasgmvivtgkgnsgktplvhalgealggkdkyatvrfgeplsgyntdfnvfvddiaram
lqhrvividslknvigaaggnttsggisrgafdllsdigamaasrgcvviaslnptsndd
kivelvkeasrsnstslvistdvdgewqvltrtgeglqrlthtlqtsygehsvltihtsk
qsggkqasgkaiqtvikndel

Sequence, based on observed residues (ATOM records):

>d1w48b_ c.37.1.11 (B:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
mihlydaksfaklraaqyaafhtdapgswfdhtsgvlesvedgtpvlaigvesgdaivfd
knaqrivaykeksvkaedgsvsvvqvengfmkqghrgwlvdltgelvgcspvvaefgghr
yasgmvivtgkgnsgktplvhalgealggkdkyatvrfgeplsgyntdfnvfvddiaram
lqhrvividslknviisrgafdllsdigamaasrgcvviaslnptsnddkivelvkeasr
snstslvistdvdgewqvltrtgeglqrlthtlqtsygehsvltihtsqasgkaiqtvik
ndel

Timeline for d1w48b_:

• d1w48b_ first appeared in SCOP 1.71
  
• d1w48b_ appears in SCOPe 2.07