SCOPe 2.08: Domain d1vqrd_: 1vqr D:

Lineage for d1vqrd_ (1vqr D:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.211: HD-domain/PDEase-like [109603] (1 superfamily)
   multihelical; consists of two different alpha-helical bundles

4. Superfamily a.211.1: HD-domain/PDEase-like [109604] (9 families)

5. Family a.211.1.3: modified HD domain [116973] (1 protein)
   retains the superfamily core fold but lacks the conserved metal-binding site

6. Protein Hypothetical protein Cj0248 [116974] (1 species)

7. Species Campylobacter jejuni [TaxId:197] [116975] (1 PDB entry)
   Uniprot Q9PIP7

8. Domain d1vqrd_: 1vqr D: [114018]
   Other proteins in same PDB: d1vqra2
   Structural genomics target

Details for d1vqrd_

PDB Entry: 1vqr, 2.25 Å

PDB Description: crystal structure of a virulence factor (cj0248) from campylobacter jejuni subsp. jejuni at 2.25 a resolution

PDB Compounds: (D:) hypothetical protein Cj0248

SCOPe Domain Sequences for d1vqrd_:

Sequence, based on SEQRES records:

>d1vqrd_ a.211.1.3 (D:) Hypothetical protein Cj0248 {Campylobacter jejuni [TaxId: 197]}
mnelllksvevlpplpdtvsklrkyvseansnietmkvaeiissdplmtakllqlanspy
ygftreittinqvitllgvgniinivmadsirdnfkidvspyglntqnflktcneeatfi
anwlndedkklshllvpcamllrlgivifsnfliqnhkdkdflaflnknenlalaenefl
gvdhisflgfllhrwnfddvliesicfvrtphaarekvkksayalaitdhlfaphdgssp
fnakaavallkeaktqginfdlnnllsklpnkakenl

Sequence, based on observed residues (ATOM records):

>d1vqrd_ a.211.1.3 (D:) Hypothetical protein Cj0248 {Campylobacter jejuni [TaxId: 197]}
mnelllksvevlpplpdtvsklrkyvietmkvaeiissdplmtakllqlanspyygftre
ittinqvitllgvgniinivmadnfkidvspyglntqnflktcneeatfianwlndedkk
lshllvpcamllrlgivifsnfliqnhkdkdflaflnknenlalaeneflgvdhisflgf
llhrwnfddvliesicfvrtphaarekvkksayalaitdhlfaphdgsspfnakaavall
keaktqginfdlnnllsklpnkakenl

Timeline for d1vqrd_:

• d1vqrd_ first appeared in SCOP 1.71
  
• d1vqrd_ appears in SCOPe 2.07