Lineage for d1vpxm1 (1vpx M:1-204)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2834402Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2834403Family c.1.10.1: Class I aldolase [51570] (13 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 2834467Protein Decameric fructose-6-phosphate aldolase/transaldolase [75085] (3 species)
    forms helix-swapped pentamers
  7. 2834479Species Thermotoga maritima [TaxId:2336] [117379] (1 PDB entry)
    Uniprot Q9WYD1
  8. 2834492Domain d1vpxm1: 1vpx M:1-204 [113989]
    Other proteins in same PDB: d1vpxa2, d1vpxb2, d1vpxc2, d1vpxd2, d1vpxe2, d1vpxf2, d1vpxg2, d1vpxh2, d1vpxi2, d1vpxj2, d1vpxk2, d1vpxl2, d1vpxm2, d1vpxn2, d1vpxo2, d1vpxp2, d1vpxq2, d1vpxr2, d1vpxs2, d1vpxt2
    Structural genomics target
    complexed with gol, so4

Details for d1vpxm1

PDB Entry: 1vpx (more details), 2.4 Å

PDB Description: Crystal structure of Transaldolase (EC (TM0295) from Thermotoga maritima at 2.40 A resolution
PDB Compounds: (M:) PROTEIN (Transaldolase (EC

SCOPe Domain Sequences for d1vpxm1:

Sequence, based on SEQRES records: (download)

>d1vpxm1 c.1.10.1 (M:1-204) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]}

Sequence, based on observed residues (ATOM records): (download)

>d1vpxm1 c.1.10.1 (M:1-204) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]}

SCOPe Domain Coordinates for d1vpxm1:

Click to download the PDB-style file with coordinates for d1vpxm1.
(The format of our PDB-style files is described here.)

Timeline for d1vpxm1:

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