SCOP 1.75: Domain d1vpka1: 1vpk A:1-120

Lineage for d1vpka1 (1vpk A:1-120)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.131: DNA clamp [55978] (1 superfamily)
   contains two helices and two beta sheets
   duplication: fold has internal pseudo two-fold symmetry

4. Superfamily d.131.1: DNA clamp [55979] (2 families)

5. Family d.131.1.1: DNA polymerase III, beta subunit [55980] (1 protein)
   duplication: consists of three domains of this fold

6. Protein DNA polymerase III, beta subunit [55981] (2 species)

7. Species Thermotoga maritima [TaxId:2336] [118108] (1 PDB entry)
   Uniprot Q9WYA0

8. Domain d1vpka1: 1vpk A:1-120 [113963]
   Structural genomics target

Details for d1vpka1

PDB Entry: 1vpk, 2 Å

PDB Description: Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution

PDB Compounds: (A:) DNA polymerase III, beta subunit

SCOP Domain Sequences for d1vpka1:

Sequence; same for both SEQRES and ATOM records:

>d1vpka1 d.131.1.1 (A:1-120) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
mkvtvttlelkdkitiaskalakksvkpilagflfevkdgnfyicatdletgvkatvnaa
eisgearfvvpgdviqkmvkvlpdeitelslegdalvissgstvfrittmpadefpeitp

Timeline for d1vpka1:

• d1vpka1 first appeared in SCOP 1.71
  
• d1vpka1 appears in SCOP 1.73
  
• d1vpka1 appears in SCOPe 2.01
  
• d1vpka1 appears in the current release, SCOPe 2.08